ANL59448.1 protein (Rhizobium phaseoli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ANL59448.1

Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding. (316 aa)

Predicted Functional Partners:

ANL59451.1

0.946

ANL61571.1

0.846

gsh

0.513

ANL59450.1

0.501

ANL57812.1

0.478

ANL57707.1

0.465

csd

0.403

Your Current Organism:

Rhizobium phaseoli

NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANL57707.1	ANL59448.1	AMC85_CH00269	AMC85_CH02071	Aminoglycoside phosphotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding.	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	0.465
ANL57707.1	csd	AMC85_CH00269	AMC85_CH02353	Aminoglycoside phosphotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding.	Cysteine desulfurase; Protein involved in catalytic activity, pyridoxal phosphate binding and cysteine metabolic process; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.	0.417
ANL57812.1	ANL59448.1	AMC85_CH00379	AMC85_CH02071	Glutamine amidotransferase protein.	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	0.478
ANL59448.1	ANL57707.1	AMC85_CH02071	AMC85_CH00269	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	Aminoglycoside phosphotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding.	0.465
ANL59448.1	ANL57812.1	AMC85_CH02071	AMC85_CH00379	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	Glutamine amidotransferase protein.	0.478
ANL59448.1	ANL59450.1	AMC85_CH02071	AMC85_CH02073	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	Hypothetical protein.	0.501
ANL59448.1	ANL59451.1	AMC85_CH02071	AMC85_CH02074	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	Protein involved in catalytic activity and metabolic process.	0.946
ANL59448.1	ANL61571.1	AMC85_CH02071	AMC85_CH04251	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	Protein involved in catalytic activity and metabolic process.	0.846
ANL59448.1	csd	AMC85_CH02071	AMC85_CH02353	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	Cysteine desulfurase; Protein involved in catalytic activity, pyridoxal phosphate binding and cysteine metabolic process; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.	0.403
ANL59448.1	gsh	AMC85_CH02071	AMC85_CH00868	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	Glutamate-cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.	0.513
ANL59450.1	ANL59448.1	AMC85_CH02073	AMC85_CH02071	Hypothetical protein.	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	0.501
ANL59451.1	ANL59448.1	AMC85_CH02074	AMC85_CH02071	Protein involved in catalytic activity and metabolic process.	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	0.946
ANL59451.1	ANL61571.1	AMC85_CH02074	AMC85_CH04251	Protein involved in catalytic activity and metabolic process.	Protein involved in catalytic activity and metabolic process.	0.427
ANL61571.1	ANL59448.1	AMC85_CH04251	AMC85_CH02071	Protein involved in catalytic activity and metabolic process.	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	0.846
ANL61571.1	ANL59451.1	AMC85_CH04251	AMC85_CH02074	Protein involved in catalytic activity and metabolic process.	Protein involved in catalytic activity and metabolic process.	0.427
csd	ANL57707.1	AMC85_CH02353	AMC85_CH00269	Cysteine desulfurase; Protein involved in catalytic activity, pyridoxal phosphate binding and cysteine metabolic process; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.	Aminoglycoside phosphotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding.	0.417
csd	ANL59448.1	AMC85_CH02353	AMC85_CH02071	Cysteine desulfurase; Protein involved in catalytic activity, pyridoxal phosphate binding and cysteine metabolic process; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	0.403
gsh	ANL59448.1	AMC85_CH00868	AMC85_CH02071	Glutamate-cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.	Formylglycine-generating sulfatase domain-containing protein; Protein involved in binding.	0.513