STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdACytochrome-c-type biogenesis protein CcdA; Protein involved in cytochrome complex assembly and oxidation-reduction process. (249 aa)    
Predicted Functional Partners:
ccmC
Cytochrome-c heme transporter protein CcmC/CycZ; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
  
  
 0.733
mdcF
Malonate transporter protein MdcF; Protein involved in transmembrane transport.
       0.659
ANL60743.1
HlyD family secretion protein; Protein involved in protein transport.
   
  
 0.522
cycM
Cytochrome-c CycM; Protein involved in iron ion binding, electron carrier activity and heme binding.
      
 0.501
tlpA
Thiol:disulfide interchange protein TlpA; Protein involved in oxidoreductase activity, protein disulfide oxidoreductase activity, glycerol ether metabolic process and cell redox homeostasis.
 
  
 0.490
ccmB
Cytochrome-c heme transporter protein CcmB/CycW; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
  
  
 0.484
ANL58515.1
Protein involved in electron carrier activity, protein disulfide oxidoreductase activity and cell redox homeostasis.
 
  
 0.420
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.