ANL59507.1 protein (Rhizobium phaseoli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Rhizobium phaseoli

NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANL58073.1	ANL58074.1	AMC85_CH00649	AMC85_CH00650	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	0.917
ANL58073.1	ANL59505.1	AMC85_CH00649	AMC85_CH02129	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter substrate-binding protein; Protein involved in transporter activity and transport.	0.482
ANL58073.1	ANL59506.1	AMC85_CH00649	AMC85_CH02130	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.	0.776
ANL58073.1	ANL59507.1	AMC85_CH00649	AMC85_CH02131	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.	0.933
ANL58073.1	ANL59508.1	AMC85_CH00649	AMC85_CH02132	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	0.667
ANL58073.1	ANL61580.1	AMC85_CH00649	AMC85_CH04260	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport.	0.663
ANL58073.1	dppD	AMC85_CH00649	AMC85_CH00784	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein DppD; Protein involved in ATP binding, ATPase activity and peptide transport; Belongs to the ABC transporter superfamily.	0.666
ANL58073.1	oppD	AMC85_CH00649	AMC85_CH03248	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein OppD; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	0.664
ANL58073.1	oppF	AMC85_CH00649	AMC85_CH03249	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein OppF; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	0.603
ANL58074.1	ANL58073.1	AMC85_CH00650	AMC85_CH00649	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	0.917
ANL58074.1	ANL59505.1	AMC85_CH00650	AMC85_CH02129	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter substrate-binding protein; Protein involved in transporter activity and transport.	0.481
ANL58074.1	ANL59506.1	AMC85_CH00650	AMC85_CH02130	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.	0.875
ANL58074.1	ANL59507.1	AMC85_CH00650	AMC85_CH02131	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.	0.927
ANL58074.1	ANL59509.1	AMC85_CH00650	AMC85_CH02133	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	0.443
ANL59505.1	ANL58073.1	AMC85_CH02129	AMC85_CH00649	Dipeptide ABC transporter substrate-binding protein; Protein involved in transporter activity and transport.	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	0.482
ANL59505.1	ANL58074.1	AMC85_CH02129	AMC85_CH00650	Dipeptide ABC transporter substrate-binding protein; Protein involved in transporter activity and transport.	Oligopeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.	0.481
ANL59505.1	ANL59506.1	AMC85_CH02129	AMC85_CH02130	Dipeptide ABC transporter substrate-binding protein; Protein involved in transporter activity and transport.	Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.	0.967
ANL59505.1	ANL59507.1	AMC85_CH02129	AMC85_CH02131	Dipeptide ABC transporter substrate-binding protein; Protein involved in transporter activity and transport.	Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.	0.965
ANL59505.1	ANL59508.1	AMC85_CH02129	AMC85_CH02132	Dipeptide ABC transporter substrate-binding protein; Protein involved in transporter activity and transport.	Dipeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	0.929
ANL59505.1	ANL59509.1	AMC85_CH02129	AMC85_CH02133	Dipeptide ABC transporter substrate-binding protein; Protein involved in transporter activity and transport.	Dipeptide ABC transporter ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	0.922