ANL59536.1 protein (Rhizobium phaseoli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Rhizobium phaseoli

NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANL57811.1	ANL57968.1	AMC85_CH00377	AMC85_CH00537	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	0.528
ANL57811.1	ANL59524.1	AMC85_CH00377	AMC85_CH02148	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	0.596
ANL57811.1	ANL59536.1	AMC85_CH00377	AMC85_CH02160	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	0.759
ANL57811.1	ANL59596.1	AMC85_CH00377	AMC85_CH02220	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding and regulation of transcription, DNA-dependent.	0.686
ANL57968.1	ANL57811.1	AMC85_CH00537	AMC85_CH00377	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	0.528
ANL57968.1	ANL59536.1	AMC85_CH00537	AMC85_CH02160	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	0.576
ANL59524.1	ANL57811.1	AMC85_CH02148	AMC85_CH00377	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	0.596
ANL59524.1	ANL59536.1	AMC85_CH02148	AMC85_CH02160	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	0.663
ANL59524.1	ANL60400.1	AMC85_CH02148	AMC85_CH03045	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	0.678
ANL59532.1	ANL59533.1	AMC85_CH02156	AMC85_CH02157	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter ATP-binding protein; Protein involved in ATP binding and ATPase activity.	0.991
ANL59532.1	ANL59534.1	AMC85_CH02156	AMC85_CH02158	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter permease protein; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.	0.993
ANL59532.1	ANL59535.1	AMC85_CH02156	AMC85_CH02159	Sugar ABC transporter substrate-binding protein.	Sugar ABC transporter permease protein; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.	0.993
ANL59532.1	ANL59536.1	AMC85_CH02156	AMC85_CH02160	Sugar ABC transporter substrate-binding protein.	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	0.582
ANL59533.1	ANL59532.1	AMC85_CH02157	AMC85_CH02156	Sugar ABC transporter ATP-binding protein; Protein involved in ATP binding and ATPase activity.	Sugar ABC transporter substrate-binding protein.	0.991
ANL59533.1	ANL59534.1	AMC85_CH02157	AMC85_CH02158	Sugar ABC transporter ATP-binding protein; Protein involved in ATP binding and ATPase activity.	Sugar ABC transporter permease protein; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.	0.996
ANL59533.1	ANL59535.1	AMC85_CH02157	AMC85_CH02159	Sugar ABC transporter ATP-binding protein; Protein involved in ATP binding and ATPase activity.	Sugar ABC transporter permease protein; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.	0.996
ANL59533.1	ANL59536.1	AMC85_CH02157	AMC85_CH02160	Sugar ABC transporter ATP-binding protein; Protein involved in ATP binding and ATPase activity.	GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.	0.780
ANL59533.1	glmU	AMC85_CH02157	AMC85_CH02161	Sugar ABC transporter ATP-binding protein; Protein involved in ATP binding and ATPase activity.	Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.	0.563
ANL59534.1	ANL59532.1	AMC85_CH02158	AMC85_CH02156	Sugar ABC transporter permease protein; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.	Sugar ABC transporter substrate-binding protein.	0.993
ANL59534.1	ANL59533.1	AMC85_CH02158	AMC85_CH02157	Sugar ABC transporter permease protein; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.	Sugar ABC transporter ATP-binding protein; Protein involved in ATP binding and ATPase activity.	0.996