STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL59553.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.791
ANL59554.1
Protein involved in N-acetyltransferase activity.
       0.778
ANL58086.1
Protein involved in DNA ligase (ATP) activity, ATP binding, DNA repair and DNA recombination.
 
    0.612
ANL60430.1
Protein involved in DNA ligase (ATP) activity, ATP binding, DNA repair and DNA recombination.
 
    0.564
ANL58566.1
Protein involved in DNA ligase (ATP) activity, DNA repair and DNA recombination.
 
    0.537
ANL60429.1
Protein involved in DNA ligase (ATP) activity, DNA repair and DNA recombination.
 
    0.537
ANL59400.1
Protein involved in DNA ligase (ATP) activity, ATP binding, DNA repair and DNA recombination.
 
    0.525
ssb
Single-stranded DNA-binding protein Ssb; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.449
ANL61371.1
Protein involved in binding, ATP-dependent DNA helicase activity and double-strand break repair via nonhomologous end joining.
 
    0.430
ku
ATP-dependent DNA helicase Ku-type protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.
 
    0.421
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.