STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL59617.1Protein involved in serine-type D-Ala-D-Ala carboxypeptidase activity and proteolysis; Belongs to the peptidase S11 family. (431 aa)    
Predicted Functional Partners:
ANL59808.1
Protein involved in serine-type D-Ala-D-Ala carboxypeptidase activity and proteolysis; Belongs to the peptidase S11 family.
  
  
 
0.919
mrcA
Penicillin-binding protein 1A; Protein involved in peptidase activity, transferase activity, transferring pentosyl groups, peptidoglycan biosynthetic process and response to antibiotic.
     
 0.909
ANL57627.1
Penicillin binding protein 1A; Protein involved in peptidase activity, transferase activity, transferring pentosyl groups, peptidoglycan biosynthetic process and response to antibiotic.
  
 
 0.904
ANL58606.1
Penicillin binding protein 1A; Protein involved in peptidase activity, transferase activity, transferring pentosyl groups, peptidoglycan biosynthetic process and response to antibiotic.
  
 
 0.904
ANL58762.1
Penicillin binding protein 1A; Protein involved in peptidase activity, transferase activity, transferring pentosyl groups, peptidoglycan biosynthetic process and response to antibiotic.
  
 
 0.904
rlpA-2
Rare lipoprotein A precursor protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
  
 0.616
holB
DNA polymerase III delta' subunit.
       0.518
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.518
secB
Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
     0.512
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
    0.485
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.