STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifS-1Cysteine desulfurase 1; Protein involved in catalytic activity, pyridoxal phosphate binding and metabolic process. (388 aa)    
Predicted Functional Partners:
nifU-2
Fe-S cluster assembly protein NifU 2; Protein involved in iron ion binding, iron-sulfur cluster binding and iron-sulfur cluster assembly.
  
 0.998
ANL61338.1
Sulfurtransferase TusA-like protein; Belongs to the sulfur carrier protein TusA family.
   
 0.993
fdxB-1
Ferredoxin-6; Protein involved in electron carrier activity and 2 iron, 2 sulfur cluster binding.
 
 0.965
ANL58776.1
Pyridoxamine 5'-phosphate oxidase-like protein; Protein involved in FMN binding, oxidoreductase activity and oxidation-reduction process.
  
 0.944
nifU-1
Fe-S cluster assembly protein NifU 1; Protein involved in iron ion binding, iron-sulfur cluster binding and iron-sulfur cluster assembly.
 
 
 0.939
ANL59724.1
SUF system Fe-S cluster assembly SufA-like protein; Protein involved in structural molecule activity, iron-sulfur cluster binding and iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
 
  
 0.936
sseA
3-mercaptopyruvate sulfurtransferase.
  
 0.923
moeB
Molybdopterin biosynthesis protein MoeZ/MoeB; Protein involved in nucleotide binding.
 
 
 0.880
ANL58623.1
Transcriptional regulator protein.
 
  
 0.875
ANL60876.1
Transcriptional regulator protein.
 
  
 0.875
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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