Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL59797.1Hypothetical protein. (359 aa)    
Predicted Functional Partners:
ANL59796.1
YcjX-like protein.
 
  
 0.994
ANL58439.1
Invasion associated locus B family protein.
  
     0.720
ANL58664.1
L,D-transpeptidase domain-containing protein; Protein involved in transferase activity.
  
     0.695
ANL59795.1
Histidine phosphatase family protein.
       0.687
ANL58663.1
L,D-transpeptidase domain-containing protein; Protein involved in transferase activity.
  
     0.681
ANL57508.1
L,D-transpeptidase domain-containing protein; Protein involved in transferase activity.
  
     0.676
ANL57661.1
Protein involved in serine-type endopeptidase activity and proteolysis.
  
     0.651
ANL61056.1
Peptidase M15 family protein.
  
     0.651
ANL60701.1
Peptidase M15 family protein.
  
     0.631
ANL59654.1
Hypothetical protein.
  
     0.626
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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