STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdxB-1Ferredoxin-6; Protein involved in electron carrier activity and 2 iron, 2 sulfur cluster binding. (106 aa)    
Predicted Functional Partners:
nifU-2
Fe-S cluster assembly protein NifU 2; Protein involved in iron ion binding, iron-sulfur cluster binding and iron-sulfur cluster assembly.
  
 0.982
nifS-1
Cysteine desulfurase 1; Protein involved in catalytic activity, pyridoxal phosphate binding and metabolic process.
 
 0.965
ANL59059.1
Cytochrome P450 protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, heme binding and oxidation-reduction process; Belongs to the cytochrome P450 family.
 
 0.947
ANL60115.1
Protein involved in oxidoreductase activity, flavin adenine dinucleotide binding and oxidation-reduction process.
 
 
 0.936
preT
Dihydropyrimidine dehydrogenase subunit A; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process.
    
 0.913
gltD
Glutamate synthase (NADPH) small subunit; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process.
    
 0.913
ANL59724.1
SUF system Fe-S cluster assembly SufA-like protein; Protein involved in structural molecule activity, iron-sulfur cluster binding and iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
 
 
 0.891
ANL58581.1
Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.
  
 
 0.879
nuoI-1
NADH dehydrogenase (quinone) subunit I 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.853
nuoI-2
NADH dehydrogenase (quinone) subunit I 2; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.853
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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