STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL59830.1Flp pilus assembly Tad-like protein. (427 aa)    
Predicted Functional Partners:
cpaE
Flp pilus assembly ATP-binding protein CpaE.
 
  
 0.768
cpaB-1
Flp pilus assembly protein CpaB 1.
 
  
 0.760
ANL59348.1
Hypothetical protein.
 
     0.731
ANL57694.1
Type II secretion system F domain-containing protein.
 
  
 0.713
ANL60233.1
Hypothetical protein.
  
     0.671
ANL61007.1
Hypothetical protein.
  
     0.608
ANL57695.1
Type II secretion system F domain-containing protein.
 
    0.592
ANL57685.1
Flp pilus assembly TadG-like protein; Overlaps another CDS with the same product name.
 
    0.581
cpaD
Pilus biogenesis protein CpaD.
 
     0.553
cpaF-1
Flp pilus assembly ATP-binding protein CpaF 1; Protein involved in ATP binding and transport.
 
  
 0.546
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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