Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANL57572.1 | arcA | AMC85_CH00129 | AMC85_CH00130 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Protein involved in arginine deiminase activity and arginine catabolic process. | 0.998 |
| ANL57572.1 | argB | AMC85_CH00129 | AMC85_CH00468 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.876 |
| ANL57572.1 | argC | AMC85_CH00129 | AMC85_CH01627 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.859 |
| ANL57572.1 | argF | AMC85_CH00129 | AMC85_CH00562 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.916 |
| ANL57572.1 | argG-1 | AMC85_CH00129 | AMC85_CH02686 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Protein involved in argininosuccinate synthase activity, ATP binding and arginine biosynthetic process; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.976 |
| ANL57572.1 | argH | AMC85_CH00129 | AMC85_CH03980 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate lyase; Protein involved in catalytic activity and arginine biosynthetic process via ornithine. | 0.859 |
| ANL57572.1 | carB | AMC85_CH00129 | AMC85_CH03123 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl phosphate synthetase large subunit; Protein involved in ATP binding, ligase activity and nitrogen compound metabolic process; Belongs to the CarB family. | 0.900 |
| aatA-1 | argG-1 | AMC85_CH03145 | AMC85_CH02686 | Aspartate aminotransferase A 1; Protein involved in catalytic activity, pyridoxal phosphate binding and biosynthetic process. | Protein involved in argininosuccinate synthase activity, ATP binding and arginine biosynthetic process; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.917 |
| aatA-1 | purA | AMC85_CH03145 | AMC85_CH03507 | Aspartate aminotransferase A 1; Protein involved in catalytic activity, pyridoxal phosphate binding and biosynthetic process. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.910 |
| aatA-1 | purA-2 | AMC85_CH03145 | AMC85_CH04184 | Aspartate aminotransferase A 1; Protein involved in catalytic activity, pyridoxal phosphate binding and biosynthetic process. | Adenylosuccinate synthase protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.910 |
| arcA | ANL57572.1 | AMC85_CH00130 | AMC85_CH00129 | Protein involved in arginine deiminase activity and arginine catabolic process. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.998 |
| arcA | argF | AMC85_CH00130 | AMC85_CH00562 | Protein involved in arginine deiminase activity and arginine catabolic process. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.987 |
| arcA | argG-1 | AMC85_CH00130 | AMC85_CH02686 | Protein involved in arginine deiminase activity and arginine catabolic process. | Protein involved in argininosuccinate synthase activity, ATP binding and arginine biosynthetic process; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.915 |
| arcA | argH | AMC85_CH00130 | AMC85_CH03980 | Protein involved in arginine deiminase activity and arginine catabolic process. | Argininosuccinate lyase; Protein involved in catalytic activity and arginine biosynthetic process via ornithine. | 0.918 |
| argB | ANL57572.1 | AMC85_CH00468 | AMC85_CH00129 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.876 |
| argB | argC | AMC85_CH00468 | AMC85_CH01627 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.998 |
| argB | argF | AMC85_CH00468 | AMC85_CH00562 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.924 |
| argB | argG-1 | AMC85_CH00468 | AMC85_CH02686 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Protein involved in argininosuccinate synthase activity, ATP binding and arginine biosynthetic process; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.921 |
| argB | argH | AMC85_CH00468 | AMC85_CH03980 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Argininosuccinate lyase; Protein involved in catalytic activity and arginine biosynthetic process via ornithine. | 0.973 |
| argB | carB | AMC85_CH00468 | AMC85_CH03123 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Carbamoyl phosphate synthetase large subunit; Protein involved in ATP binding, ligase activity and nitrogen compound metabolic process; Belongs to the CarB family. | 0.798 |
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