STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL60065.1phytanoyl-CoA dioxygenase protein. (306 aa)    
Predicted Functional Partners:
ANL58369.1
Hypothetical protein.
 
     0.746
ANL60064.1
AraC family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding and regulation of transcription, DNA-dependent.
  
    0.547
ANL59817.1
Phosphoglycerate mutase family protein; Belongs to the phosphoglycerate mutase family.
  
    0.527
ANL60653.1
Dihydrodipicolinate synthetase-like protein; Protein involved in catalytic activity and metabolic process; Belongs to the DapA family.
  
     0.488
ANL57524.1
Hypothetical protein.
  
     0.460
ANL60066.1
Pyridoxal-dependent amino acid decarboxylase protein; Protein involved in catalytic activity, pyridoxal phosphate binding and carboxylic acid metabolic process.
  
    0.431
ANL61655.1
Microcystin LR degradation MlrC protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
  
     0.423
tam
Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
 
     0.420
ANL61150.1
Protein involved in N-acetyltransferase activity.
 
   
 0.416
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.