STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL60147.1WD40/YVTN repeat-like domain-containing protein; Protein involved in protein binding. (209 aa)    
Predicted Functional Partners:
ANL60148.1
Hypothetical protein.
 
     0.932
ANL60149.1
Thioredoxin-like protein.
 
     0.878
ANL60150.1
Hypothetical protein.
 
     0.877
ANL58672.1
Thioredoxin-like protein.
 
     0.723
ANL60013.1
Thioredoxin-like protein.
 
     0.656
ANL60259.1
Anti-sigma factor protein.
  
     0.515
ANL60564.1
Anti-sigma factor protein.
  
     0.478
ANL58401.1
Phospholipase D-like domain-containing protein.
  
     0.421
ANL60724.1
Transcriptional regulator SARP family/tetratricopeptide repeat domain-containing protein; Protein involved in two-component response regulator activity, DNA binding, two-component signal transduction system (phosphorelay) and regulation of transcription, DNA-dependent.
  
 
   0.400
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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