ANL60207.1 protein (Rhizobium phaseoli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ANL60207.1

Protein involved in transporter activity and transport. (564 aa)

Predicted Functional Partners:

ANL60208.1

0.969

ANL60206.1

0.888

ANL59576.1

0.731

ANL59575.1

0.679

fbpA

0.628

ANL60205.1

0.570

ANL60204.1

0.505

ANL59852.1

0.499

ANL60209.1

0.493

ANL61096.1

0.475

Your Current Organism:

Rhizobium phaseoli

NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANL59575.1	ANL59576.1	AMC85_CH02199	AMC85_CH02200	ABC transporter substrate-binding protein.	ABC transporter substrate-binding protein.	0.953
ANL59575.1	ANL59852.1	AMC85_CH02199	AMC85_CH02484	ABC transporter substrate-binding protein.	Iron-siderophore ABC transporter substrate-binding protein; Protein involved in binding.	0.433
ANL59575.1	ANL60206.1	AMC85_CH02199	AMC85_CH02844	ABC transporter substrate-binding protein.	ABC transporter ATP-binding protein; Protein involved in ATP binding, ATPase activity, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances and transport; Belongs to the ABC transporter superfamily.	0.814
ANL59575.1	ANL60207.1	AMC85_CH02199	AMC85_CH02845	ABC transporter substrate-binding protein.	Protein involved in transporter activity and transport.	0.679
ANL59575.1	ANL60208.1	AMC85_CH02199	AMC85_CH02846	ABC transporter substrate-binding protein.	ABC transporter substrate-binding protein.	0.925
ANL59575.1	ANL61096.1	AMC85_CH02199	AMC85_CH03763	ABC transporter substrate-binding protein.	ABC transporter substrate-binding protein.	0.900
ANL59575.1	fbpA	AMC85_CH02199	AMC85_CH04331	ABC transporter substrate-binding protein.	Fe(3+) ABC transporter substrate-binding protein FbpA.	0.916
ANL59576.1	ANL59575.1	AMC85_CH02200	AMC85_CH02199	ABC transporter substrate-binding protein.	ABC transporter substrate-binding protein.	0.953
ANL59576.1	ANL59852.1	AMC85_CH02200	AMC85_CH02484	ABC transporter substrate-binding protein.	Iron-siderophore ABC transporter substrate-binding protein; Protein involved in binding.	0.436
ANL59576.1	ANL60206.1	AMC85_CH02200	AMC85_CH02844	ABC transporter substrate-binding protein.	ABC transporter ATP-binding protein; Protein involved in ATP binding, ATPase activity, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances and transport; Belongs to the ABC transporter superfamily.	0.814
ANL59576.1	ANL60207.1	AMC85_CH02200	AMC85_CH02845	ABC transporter substrate-binding protein.	Protein involved in transporter activity and transport.	0.731
ANL59576.1	ANL60208.1	AMC85_CH02200	AMC85_CH02846	ABC transporter substrate-binding protein.	ABC transporter substrate-binding protein.	0.930
ANL59576.1	ANL61096.1	AMC85_CH02200	AMC85_CH03763	ABC transporter substrate-binding protein.	ABC transporter substrate-binding protein.	0.900
ANL59576.1	fbpA	AMC85_CH02200	AMC85_CH04331	ABC transporter substrate-binding protein.	Fe(3+) ABC transporter substrate-binding protein FbpA.	0.917
ANL59852.1	ANL59575.1	AMC85_CH02484	AMC85_CH02199	Iron-siderophore ABC transporter substrate-binding protein; Protein involved in binding.	ABC transporter substrate-binding protein.	0.433
ANL59852.1	ANL59576.1	AMC85_CH02484	AMC85_CH02200	Iron-siderophore ABC transporter substrate-binding protein; Protein involved in binding.	ABC transporter substrate-binding protein.	0.436
ANL59852.1	ANL60207.1	AMC85_CH02484	AMC85_CH02845	Iron-siderophore ABC transporter substrate-binding protein; Protein involved in binding.	Protein involved in transporter activity and transport.	0.499
ANL59852.1	ANL61096.1	AMC85_CH02484	AMC85_CH03763	Iron-siderophore ABC transporter substrate-binding protein; Protein involved in binding.	ABC transporter substrate-binding protein.	0.407
ANL60204.1	ANL60205.1	AMC85_CH02842	AMC85_CH02843	Protein involved in hydrolase activity.	Endonuclease/exonuclease/phosphatase family protein.	0.838
ANL60204.1	ANL60206.1	AMC85_CH02842	AMC85_CH02844	Protein involved in hydrolase activity.	ABC transporter ATP-binding protein; Protein involved in ATP binding, ATPase activity, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances and transport; Belongs to the ABC transporter superfamily.	0.504