ANL60234.1 protein (Rhizobium phaseoli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ANL60234.1

Glycosyltransferase family 2 protein. (351 aa)

Predicted Functional Partners:

ANL60233.1

0.790

ANL58581.1

0.572

ANL58218.1

0.544

ANL60235.1

0.537

ANL59028.1

0.527

ANL58217.1

0.458

ANL58990.1

0.445

ANL58220.1

0.429

Your Current Organism:

Rhizobium phaseoli

NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANL58217.1	ANL58218.1	AMC85_CH00795	AMC85_CH00796	Hypothetical protein.	DegT/DnrJ/EryC1/StrS family aminotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the DegT/DnrJ/EryC1 family.	0.963
ANL58217.1	ANL58220.1	AMC85_CH00795	AMC85_CH00798	Hypothetical protein.	Polysaccharide ABC transporter Wzt-like ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	0.825
ANL58217.1	ANL58990.1	AMC85_CH00795	AMC85_CH01580	Hypothetical protein.	DegT/DnrJ/EryC1/StrS family aminotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the DegT/DnrJ/EryC1 family.	0.646
ANL58217.1	ANL59028.1	AMC85_CH00795	AMC85_CH01619	Hypothetical protein.	Undecaprenyl-phosphate glucose phosphotransferase protein.	0.769
ANL58217.1	ANL60234.1	AMC85_CH00795	AMC85_CH02872	Hypothetical protein.	Glycosyltransferase family 2 protein.	0.458
ANL58218.1	ANL58217.1	AMC85_CH00796	AMC85_CH00795	DegT/DnrJ/EryC1/StrS family aminotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the DegT/DnrJ/EryC1 family.	Hypothetical protein.	0.963
ANL58218.1	ANL58220.1	AMC85_CH00796	AMC85_CH00798	DegT/DnrJ/EryC1/StrS family aminotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the DegT/DnrJ/EryC1 family.	Polysaccharide ABC transporter Wzt-like ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	0.815
ANL58218.1	ANL58581.1	AMC85_CH00796	AMC85_CH01164	DegT/DnrJ/EryC1/StrS family aminotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the DegT/DnrJ/EryC1 family.	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	0.554
ANL58218.1	ANL59028.1	AMC85_CH00796	AMC85_CH01619	DegT/DnrJ/EryC1/StrS family aminotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the DegT/DnrJ/EryC1 family.	Undecaprenyl-phosphate glucose phosphotransferase protein.	0.973
ANL58218.1	ANL60234.1	AMC85_CH00796	AMC85_CH02872	DegT/DnrJ/EryC1/StrS family aminotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the DegT/DnrJ/EryC1 family.	Glycosyltransferase family 2 protein.	0.544
ANL58220.1	ANL58217.1	AMC85_CH00798	AMC85_CH00795	Polysaccharide ABC transporter Wzt-like ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	Hypothetical protein.	0.825
ANL58220.1	ANL58218.1	AMC85_CH00798	AMC85_CH00796	Polysaccharide ABC transporter Wzt-like ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	DegT/DnrJ/EryC1/StrS family aminotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the DegT/DnrJ/EryC1 family.	0.815
ANL58220.1	ANL58581.1	AMC85_CH00798	AMC85_CH01164	Polysaccharide ABC transporter Wzt-like ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	0.605
ANL58220.1	ANL59028.1	AMC85_CH00798	AMC85_CH01619	Polysaccharide ABC transporter Wzt-like ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	Undecaprenyl-phosphate glucose phosphotransferase protein.	0.498
ANL58220.1	ANL60234.1	AMC85_CH00798	AMC85_CH02872	Polysaccharide ABC transporter Wzt-like ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	Glycosyltransferase family 2 protein.	0.429
ANL58581.1	ANL58218.1	AMC85_CH01164	AMC85_CH00796	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	DegT/DnrJ/EryC1/StrS family aminotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the DegT/DnrJ/EryC1 family.	0.554
ANL58581.1	ANL58220.1	AMC85_CH01164	AMC85_CH00798	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	Polysaccharide ABC transporter Wzt-like ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.	0.605
ANL58581.1	ANL58990.1	AMC85_CH01164	AMC85_CH01580	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	DegT/DnrJ/EryC1/StrS family aminotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the DegT/DnrJ/EryC1 family.	0.554
ANL58581.1	ANL59028.1	AMC85_CH01164	AMC85_CH01619	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	Undecaprenyl-phosphate glucose phosphotransferase protein.	0.794
ANL58581.1	ANL60234.1	AMC85_CH01164	AMC85_CH02872	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	Glycosyltransferase family 2 protein.	0.572