Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ANL60383.1Protein involved in nucleotide binding. (353 aa)    
Predicted Functional Partners:
ANL60385.1
Protein involved in transporter activity and transport.
 
     0.941
ANL60384.1
Sugar ABC transporter permease protein; Protein involved in transporter activity and transport.
 
     0.925
ANL60386.1
Sugar ABC transporter substrate-binding protein; Protein involved in transporter activity and transport.
 
     0.850
ANL60382.1
Sugar ABC transporter ATP-binding protein; Protein involved in ATP binding, ATPase activity, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances and transport; Belongs to the ABC transporter superfamily.
       0.768
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
      
 0.713
ANL60388.1
GntR family transcriptional regulator protein; Protein involved in DNA binding and regulation of transcription, DNA-dependent.
 
    0.576
ANL59332.1
Hypothetical protein.
  
     0.558
ANL59129.1
NAD-dependent epimerase/dehydratase family protein; Protein involved in nucleotide binding, coenzyme binding and cellular metabolic process.
 
    0.520
lysS
lysyl-tRNA synthetase; Protein involved in nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding and tRNA aminoacylation for protein translation; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.513
ANL61626.1
GntR family transcriptional regulator protein; Protein involved in DNA binding and regulation of transcription, DNA-dependent.
 
    0.501
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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