STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL60405.1Excinuclease ABC subunit C domain-containing protein; Protein involved in nuclease activity and DNA repair. (98 aa)    
Predicted Functional Partners:
ANL58363.1
Urease accessory domain-containing protein; Protein involved in nickel cation binding, protein complex assembly and urea metabolic process.
  
  
 0.463
ANL58364.1
SAM-dependent methyltransferase protein; Belongs to the methyltransferase superfamily.
  
  
 0.463
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.461
ANL57982.1
Restriction endonuclease type 2-like protein.
  
     0.455
ANL60803.1
Restriction endonuclease type 2-like protein.
  
     0.454
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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