STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
raiR-1Transcriptional activator protein 1; Protein involved in two-component response regulator activity, DNA binding, two-component signal transduction system (phosphorelay) and regulation of transcription, DNA-dependent. (277 aa)    
Predicted Functional Partners:
raiI-1
Acyl-homoserine-lactone synthase 1; Protein involved in signal transduction.
 
 
 0.988
ANL60406.1
Hypothetical protein.
       0.569
ANL58097.1
Protein involved in two-component response regulator activity, two-component signal transduction system (phosphorelay) and regulation of transcription, DNA-dependent.
  
 
 0.545
ANL59208.1
Protein involved in two-component sensor activity, protein dimerization activity and two-component signal transduction system (phosphorelay).
  
 
 0.539
ANL60831.1
Sensor histidine kinase protein; Protein involved in signal transducer activity, protein histidine kinase activity, signal transduction and peptidyl-histidine phosphorylation.
  
 
 0.531
ANL60650.1
Sensor histidine kinase/response regulator hybrid protein; Protein involved in signal transducer activity, signal transduction and regulation of transcription, DNA-dependent.
  
 
 0.501
ANL59602.1
GGDEF/EAL domain-containing protein; Protein involved in phosphorus-oxygen lyase activity, cyclic nucleotide biosynthetic process and intracellular signal transduction.
  
 
 0.434
ANL60409.1
Hypothetical protein.
       0.433
ANL57865.1
Sensor histidine kinase/response regulator hybrid protein; Protein involved in signal transducer activity, signal transduction and regulation of transcription, DNA-dependent.
  
 
 0.429
ANL58344.1
LuxR family transcriptional regulator protein; Protein involved in two-component response regulator activity, DNA binding, two-component signal transduction system (phosphorelay) and regulation of transcription, DNA-dependent.
 
 
0.425
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.