Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL60427.1Hypothetical protein. (488 aa)    
Predicted Functional Partners:
ANL59881.1
OmpA/MotB family outer membrane protein.
   
 
 0.654
ANL60428.1
Hypothetical protein.
       0.651
ANL57634.1
Cell division DNA translocase FtsK/SpoIIIE family protein; Protein involved in nucleotide binding, DNA binding, ATP binding, cell cycle, chromosome segregation and cell division; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.608
ftsK
Cell division DNA translocase FtsK; Protein involved in nucleotide binding, DNA binding, ATP binding, cell cycle, chromosome segregation and cell division.
    
 
 0.608
ANL61012.1
Hypothetical protein.
    
   0.576
ANL58196.1
Serralysin-like metalloprotease domain-containing protein; Protein involved in metallopeptidase activity, zinc ion binding and proteolysis.
 
 
 0.552
degP-1
Protein involved in serine-type endopeptidase activity and proteolysis; Belongs to the peptidase S1C family.
  
 
 0.466
ANL58581.1
Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.
  
 
 0.454
ANL58097.1
Protein involved in two-component response regulator activity, two-component signal transduction system (phosphorelay) and regulation of transcription, DNA-dependent.
     
 0.431
ANL60032.1
Hypothetical protein.
  
 
 0.414
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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