STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctDC4-dicarboxylate transport response regulator DctD; Protein involved in protein binding, nucleoside-triphosphatase activity and regulation of transcription, DNA-dependent. (448 aa)    
Predicted Functional Partners:
dctB
C4-dicarboxylate transport sensor histidine kinase DctB; Member of the two-component regulatory system DctB/DctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates DctD in response to environmental signals.
 0.997
ANL60931.1
Sensor histidine kinase protein; Member of the two-component regulatory system DctB/DctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates DctD in response to environmental signals.
 0.975
ANL60930.1
C4-dicarboxylate transport response regulator protein DctD; Protein involved in protein binding, nucleoside-triphosphatase activity and regulation of transcription, DNA-dependent.
  
  
 
0.905
dctA
C4-dicarboxylate transport protein DctA; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.835
ntrB
Protein involved in signal transducer activity and regulation of transcription, DNA-dependent.
 
 0.779
rpoN-1
RNA polymerase sigma-54 factor RpoN 1; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.760
ANL61238.1
Transcriptional regulator protein; Protein involved in protein binding and regulation of transcription, DNA-dependent.
 
     0.670
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.633
ANL57575.1
Sensor histidine kinase FixL-like protein; Protein involved in signal transducer activity and signal transduction.
 
 
 0.629
fliG
Protein involved in motor activity, ciliary or flagellar motility and chemotaxis.
  
  
 0.622
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.