Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ANL60562.1Tetratricopeptide repeat-containing protein; Protein involved in protein binding. (186 aa)    
Predicted Functional Partners:
ANL60582.1
Hypothetical protein.
  
     0.758
ANL60572.1
Hypothetical protein.
  
     0.650
ANL60564.1
Anti-sigma factor protein.
 
     0.569
ANL60561.1
Calcineurin-like phosphoesterase domain-containing protein.
  
    0.477
ANL60563.1
RNA polymerase sigma factor protein; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity, sigma factor activity, transcription initiation, DNA-dependent and regulation of transcription, DNA-dependent; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.473
ANL58581.1
Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.
  
 
 0.465
ANL58214.1
Anti-sigma factor protein.
 
     0.444
degP-1
Protein involved in serine-type endopeptidase activity and proteolysis; Belongs to the peptidase S1C family.
  
 
 0.421
ANL58830.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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