Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
ANL60564.1Anti-sigma factor protein. (280 aa)    
Predicted Functional Partners:
ANL60563.1
RNA polymerase sigma factor protein; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity, sigma factor activity, transcription initiation, DNA-dependent and regulation of transcription, DNA-dependent; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.907
rpoE-1
RNA polymerase sigma-24 factor RpoE 1; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity, sigma factor activity, transcription initiation, DNA-dependent and regulation of transcription, DNA-dependent; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.843
rpoE-3
RNA polymerase sigma-24 factor RpoE 3; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity, sigma factor activity, transcription initiation, DNA-dependent and regulation of transcription, DNA-dependent; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.833
rpoE-2
RNA polymerase sigma-24 factor RpoE 2; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity, sigma factor activity, transcription initiation, DNA-dependent and regulation of transcription, DNA-dependent; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.601
ANL60562.1
Tetratricopeptide repeat-containing protein; Protein involved in protein binding.
 
     0.569
ANL60791.1
Response regulator protein; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity, sigma factor activity, transcription initiation, DNA-dependent and regulation of transcription, DNA-dependent.
  
 
 0.505
ANL60148.1
Hypothetical protein.
  
     0.504
ANL60257.1
Lipoprotein repeat-containing protein.
 
     0.498
ANL60849.1
Chromosome segregation SMC protein.
  
     0.495
ANL60147.1
WD40/YVTN repeat-like domain-containing protein; Protein involved in protein binding.
  
     0.478
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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