Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL60582.1Hypothetical protein. (357 aa)    
Predicted Functional Partners:
ANL60562.1
Tetratricopeptide repeat-containing protein; Protein involved in protein binding.
  
     0.758
ANL58212.1
Tetratricopeptide repeat-containing protein; Protein involved in protein binding.
  
     0.656
tdk
Protein involved in thymidine kinase activity and ATP binding.
       0.614
ANL60581.1
Hypothetical protein.
       0.603
ANL60572.1
Hypothetical protein.
  
     0.519
ANL58422.1
Hypothetical protein.
  
     0.513
ANL58830.1
Hypothetical protein.
  
     0.468
ANL58286.1
Hypothetical protein.
  
     0.462
ANL57743.1
DD-peptidase zinc-binding domain-containing protein.
  
     0.445
ANL59253.1
Hypothetical protein.
  
     0.432
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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