STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppAOligopeptide ABC transporter substrate-binding protein OppA; Protein involved in transporter activity and transport. (526 aa)    
Predicted Functional Partners:
oppB
Oligopeptide ABC transporter permease protein OppB; Protein involved in transporter activity and transport.
 
 0.994
oppC
Oligopeptide ABC transporter permease protein OppC; Protein involved in transporter activity and transport.
 
 0.993
oppD
Oligopeptide ABC transporter ATP-binding protein OppD; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.
 
 
 0.987
oppF
Oligopeptide ABC transporter ATP-binding protein OppF; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.
 
 
 0.987
ANL59506.1
Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.
 
 0.842
ANL59507.1
Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.
 
 0.839
dppB
Dipeptide ABC transporter permease protein DppB; Protein involved in transporter activity and transport.
 
 0.837
ANL61579.1
Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.
 
 0.836
ANL61578.1
Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.
 
 0.825
dppC
Dipeptide ABC transporter permease protein DppC; Protein involved in transporter activity and transport.
 
 0.822
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.