STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bdhA3-hydroxybutyrate dehydrogenase; Protein involved in nucleotide binding and oxidation-reduction process. (258 aa)    
Predicted Functional Partners:
ANL58193.1
acetoacetyl-CoA synthetase protein; Protein involved in acetoacetate-CoA ligase activity and lipid metabolic process.
   
 0.909
xdhA
Xanthine dehydrogenase small subunit XdhA; Protein involved in UDP-N-acetylmuramate dehydrogenase activity, flavin adenine dinucleotide binding and oxidation-reduction process.
     
 0.882
ANL59913.1
Short-chain dehydrogenase protein; Protein involved in nucleotide binding.
  
     0.628
lldD-1
L-lactate dehydrogenase (cytochrome) 1; Protein involved in catalytic activity, oxidoreductase activity and oxidation-reduction process.
    
 
 0.620
der
GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
     
 0.593
glpK-2
Glycerol kinase 2; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.590
fabF-2
Beta-ketoacyl-acyl-carrier-protein synthase II 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.564
lacZ
beta-D-galactosidase; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds, cation binding and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 2 family.
   
  
 0.556
ANL58581.1
Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.
  
 
 0.535
ANL57469.1
Polyhydroxyalkanoate depolymerase protein.
  
   
 0.468
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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