Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bdhA3-hydroxybutyrate dehydrogenase; Protein involved in nucleotide binding and oxidation-reduction process. (258 aa)    
Predicted Functional Partners:
xdhA
Xanthine dehydrogenase small subunit XdhA; Protein involved in UDP-N-acetylmuramate dehydrogenase activity, flavin adenine dinucleotide binding and oxidation-reduction process.
     
 0.946
ANL58193.1
acetoacetyl-CoA synthetase protein; Protein involved in acetoacetate-CoA ligase activity and lipid metabolic process.
    
 0.919
lldD-1
L-lactate dehydrogenase (cytochrome) 1; Protein involved in catalytic activity, oxidoreductase activity and oxidation-reduction process.
    
 0.800
ANL59913.1
Short-chain dehydrogenase protein; Protein involved in nucleotide binding.
  
     0.628
fabF-2
Beta-ketoacyl-acyl-carrier-protein synthase II 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.601
glpK-2
Glycerol kinase 2; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
   0.583
der
GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
     
 0.534
xdhB
Xanthine dehydrogenase molybdopterin binding subunit XdhB; Protein involved in molybdenum ion binding and oxidation-reduction process.
     
 0.529
ANL57469.1
Polyhydroxyalkanoate depolymerase protein.
  
   
 0.469
bacA
ABC transporter membrane protein SbmA/BacA; Protein involved in ATP binding, ATPase activity, coupled to transmembrane movement of substances, transport and transmembrane transport.
      
 0.438
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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