STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL60632.1Helix-turn-helix domain-containing protein; Protein involved in DNA binding. (125 aa)    
Predicted Functional Partners:
ANL60631.1
Toxin-antitoxin system toxin HigB-like protein; Protein involved in hydrolase activity, acting on ester bonds.
 
 
 0.998
ANL60629.1
Cytochrome-c class 1 protein; Protein involved in iron ion binding, electron carrier activity and heme binding.
       0.714
guaD
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
       0.714
lldD-2
L-lactate dehydrogenase (cytochrome) 2; Protein involved in catalytic activity, oxidoreductase activity and oxidation-reduction process.
       0.556
ANL58644.1
Type II toxin-antitoxin system antitoxin Phd/YefM family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
   
 0.518
ANL60628.1
Protein involved in serine-type peptidase activity and proteolysis; Belongs to the peptidase S51 family.
       0.498
vapC-1
Toxin/antitoxin system endonuclease protein VapC 1; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.460
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.