STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapC-5PilT domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (136 aa)    
Predicted Functional Partners:
ANL60662.1
Type II toxin-antitoxin system antitoxin Phd/YefM family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
    0.944
ANL60663.1
Dihydroxy-acid/6-phosphogluconate dehydratase protein; Protein involved in catalytic activity and metabolic process; Belongs to the IlvD/Edd family.
       0.516
vapC-1
Toxin/antitoxin system endonuclease protein VapC 1; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.477
ANL60593.1
Hypothetical protein.
  
     0.434
bacA
ABC transporter membrane protein SbmA/BacA; Protein involved in ATP binding, ATPase activity, coupled to transmembrane movement of substances, transport and transmembrane transport.
      
 0.422
ANL58644.1
Type II toxin-antitoxin system antitoxin Phd/YefM family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
   
 0.412
ANL60664.1
Aldehyde dehydrogenase protein; Protein involved in oxidoreductase activity, oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, metabolic process and oxidation-reduction process.
       0.406
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.