STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylFXylose ABC transporter substrate-binding protein XylF. (346 aa)    
Predicted Functional Partners:
xylH
Xylose ABC transporter permease protein XylH; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.
 
 0.990
ANL60676.1
Sugar ABC transporter ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.
 
 0.973
ANL60666.1
Sugar ABC transporter permease protein; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.
 
 0.902
ANL60673.1
ROK family transcriptional regulator protein.
 
     0.780
ANL59535.1
Sugar ABC transporter permease protein; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.
  
  0.712
ANL59534.1
Sugar ABC transporter permease protein; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.701
xylA
Protein involved in xylose isomerase activity and carbohydrate metabolic process; Belongs to the xylose isomerase family.
 
  
 0.689
xynB
Beta-xylosidase; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 43 family.
  
   
 0.671
ANL59532.1
Sugar ABC transporter substrate-binding protein.
 
 
0.641
ANL59533.1
Sugar ABC transporter ATP-binding protein; Protein involved in ATP binding and ATPase activity.
 
 0.636
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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