STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylHXylose ABC transporter permease protein XylH; Protein involved in transporter activity and transport; Belongs to the binding-protein-dependent transport system permease family. (437 aa)    
Predicted Functional Partners:
xylF
Xylose ABC transporter substrate-binding protein XylF.
 
 0.990
ANL60676.1
Sugar ABC transporter ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.
 
 0.988
ANL60668.1
Sugar ABC transporter substrate-binding protein.
 
 0.970
ANL60667.1
Sugar ABC transporter ATP-binding protein; Protein involved in ATP binding and ATPase activity.
  
 0.689
ANL60673.1
ROK family transcriptional regulator protein.
 
     0.639
rmlA-2
Glucose-1-phosphate thymidylyltransferase 2; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
      
 0.509
ANL60114.1
Rhizopine ABC transporter substrate-binding protein.
     0.509
rbsB-1
Ribose ABC transporter substrate-binding protein RbsB 1.
     0.496
ANL61161.1
Ribose ABC transporter substrate-binding protein.
 
     0.488
xylA
Protein involved in xylose isomerase activity and carbohydrate metabolic process; Belongs to the xylose isomerase family.
 
  
 0.485
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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