Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANL60743.1HlyD family secretion protein; Protein involved in protein transport. (446 aa)    
Predicted Functional Partners:
ANL60744.1
Protease secretion system ABC transporter ATP-binding protein PrtD; Protein involved in ATP binding, ATPase activity, transport and transmembrane transport.
 
  
 0.989
ANL57806.1
Protease secretion system ABC transporter ATP-binding protein PrtD; Protein involved in ATP binding, ATPase activity, coupled to transmembrane movement of substances, transport and transmembrane transport.
 
  
 0.959
ANL58062.1
Protease secretion system ABC transporter ATP-binding protein PrtD; Protein involved in ATP binding, ATPase activity, coupled to transmembrane movement of substances, transport and transmembrane transport.
 
  
 0.959
yciI
Protein YciI.
      
 0.779
ANL59478.1
Serralysin-like metalloprotease domain-containing protein; Protein involved in calcium ion binding and pathogenesis.
 
  
 0.766
ccdA
Cytochrome-c-type biogenesis protein CcdA; Protein involved in cytochrome complex assembly and oxidation-reduction process.
   
  
 0.721
nodT-1
Nodulation protein NodT 1; Protein involved in transporter activity, lipid binding and transport.
  
 
 0.713
ANL58196.1
Serralysin-like metalloprotease domain-containing protein; Protein involved in metallopeptidase activity, zinc ion binding and proteolysis.
 
  
 0.638
ANL59523.1
ABC transporter permease FtsX-like protein.
  
  
 0.592
mdtC
Multidrug resistance protein MdtC; Protein involved in transporter activity and transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.538
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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