STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybhFABC transporter ATP-binding protein YbhF; Protein involved in ATP binding and ATPase activity. (581 aa)    
Predicted Functional Partners:
ybhS
ABC transporter permease protein YbhS; Protein involved in ATP binding, ATPase activity, coupled to transmembrane movement of substances and transport.
 
 0.998
ybhR
ABC transporter permease protein YbhR; Protein involved in ATP binding, ATPase activity, coupled to transmembrane movement of substances and transport.
 
 0.998
ANL60765.1
RND family efflux transporter protein; Protein involved in transmembrane transport.
 
  
 0.960
ANL60764.1
TetR family transcriptional regulator protein; Protein involved in DNA binding.
 
     0.860
ANL60586.1
Proline/glycine betaine/choline ABC transporter ATP-binding protein; Protein involved in choline transmembrane transporter activity, ATPase activity and choline transport.
 
   
 
0.754
yadH
ABC transporter permease protein YadH; Protein involved in transporter activity and transport.
 
 
 0.700
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.680
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
 
 0.645
ANL57958.1
Protein involved in transporter activity, binding and transport.
  
  
 0.597
ANL58651.1
Pectin lyase fold/virulence factor domain-containing protein.
  
 
 0.576
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.