Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL60769.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
ANL60513.1
SH3 domain-containing protein.
  
     0.707
engB
Ribosome biogenesis GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
   
    0.623
ANL59881.1
OmpA/MotB family outer membrane protein.
  
     0.551
ANL60973.1
Metallo-beta-lactamase family hydrolase protein.
  
     0.507
ANL60764.1
TetR family transcriptional regulator protein; Protein involved in DNA binding.
       0.504
ANL60765.1
RND family efflux transporter protein; Protein involved in transmembrane transport.
       0.504
ybhF
ABC transporter ATP-binding protein YbhF; Protein involved in ATP binding and ATPase activity.
       0.504
ybhS
ABC transporter permease protein YbhS; Protein involved in ATP binding, ATPase activity, coupled to transmembrane movement of substances and transport.
       0.504
ybhR
ABC transporter permease protein YbhR; Protein involved in ATP binding, ATPase activity, coupled to transmembrane movement of substances and transport.
       0.504
ANL60724.1
Transcriptional regulator SARP family/tetratricopeptide repeat domain-containing protein; Protein involved in two-component response regulator activity, DNA binding, two-component signal transduction system (phosphorelay) and regulation of transcription, DNA-dependent.
  
     0.479
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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