STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thuB-1Protein involved in nucleotide binding, metabolic process and oxidation-reduction process. (347 aa)    
Predicted Functional Partners:
thuA-1
Trehalose catabolism protein ThuA 1.
 
  
 0.945
ANL59920.1
Xylose isomerase domain-containing protein.
 
  
 0.794
iolD
3,5/4-trihydroxycyclohexane-1,2-dione hydrolase; Protein involved in thiamine pyrophosphate binding; Belongs to the TPP enzyme family.
 
  
 0.689
iolB
5-deoxy-glucuronate isomerase; Protein involved in intramolecular oxidoreductase activity, interconverting aldoses and ketoses and metabolic process.
 
  
 0.664
ANL61160.1
Xylose isomerase domain-containing protein.
 
  
 0.664
ANL59496.1
Protein involved in nucleotide binding.
  
     0.621
iolE-1
Myo-inosose-2 dehydratase 1.
 
  
 0.601
ANL60770.1
DMT superfamily inner membrane transporter protein.
       0.486
ANL58218.1
DegT/DnrJ/EryC1/StrS family aminotransferase protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.484
ANL60878.1
Hydroxypyruvate isomerase protein; Belongs to the hyi family.
 
    0.469
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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