STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thuA-1Trehalose catabolism protein ThuA 1. (261 aa)    
Predicted Functional Partners:
thuB-1
Protein involved in nucleotide binding, metabolic process and oxidation-reduction process.
 
  
 0.945
ANL59496.1
Protein involved in nucleotide binding.
 
    0.743
ANL59919.1
Protein involved in nucleotide binding.
 
    0.732
ANL61569.1
Glutamine amidotransferase-like domain-containing protein.
 
     0.706
ANL59495.1
Glutamine amidotransferase-like domain-containing protein.
 
     0.684
ANL59920.1
Xylose isomerase domain-containing protein.
 
    0.675
ndvB
Glycosyltransferase protein NdvB; Protein involved in catalytic activity, carbohydrate binding and carbohydrate metabolic process.
   
    0.655
ANL61421.1
Six-hairpin glycosidase-like protein; Protein involved in catalytic activity.
  
     0.574
ANL59921.1
Glycoside hydrolase family 2 protein; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds, cation binding and carbohydrate metabolic process.
  
     0.530
ANL59275.1
NAD-dependent epimerase/dehydratase family protein; Protein involved in nucleotide binding, coenzyme binding and cellular metabolic process.
  
    0.511
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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