Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANL58776.1 | gltB | AMC85_CH01363 | AMC85_CH03742 | Pyridoxamine 5'-phosphate oxidase-like protein; Protein involved in FMN binding, oxidoreductase activity and oxidation-reduction process. | Glutamate synthase (NADPH) large subunit; Protein involved in catalytic activity, oxidoreductase activity, acting on the CH-NH2 group of donors, nitrogen compound metabolic process and oxidation-reduction process. | 0.459 |
| ANL58776.1 | preT | AMC85_CH01363 | AMC85_CH03445 | Pyridoxamine 5'-phosphate oxidase-like protein; Protein involved in FMN binding, oxidoreductase activity and oxidation-reduction process. | Dihydropyrimidine dehydrogenase subunit A; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process. | 0.939 |
| amaB-2 | dht | AMC85_CH03454 | AMC85_CH03456 | N-carbamoyl-L-amino acid hydrolase 2; Protein involved in hydrolase activity and metabolic process. | Dihydropyrimidinase; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides and pyrimidine base catabolic process. | 0.995 |
| amaB-2 | preA | AMC85_CH03454 | AMC85_CH03446 | N-carbamoyl-L-amino acid hydrolase 2; Protein involved in hydrolase activity and metabolic process. | Dihydropyrimidine dehydrogenase subunit PreA; Protein involved in electron carrier activity, iron-sulfur cluster binding, UMP biosynthetic process and oxidation-reduction process. | 0.933 |
| amaB-2 | preT | AMC85_CH03454 | AMC85_CH03445 | N-carbamoyl-L-amino acid hydrolase 2; Protein involved in hydrolase activity and metabolic process. | Dihydropyrimidine dehydrogenase subunit A; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process. | 0.891 |
| deoA | deoD | AMC85_CH00241 | AMC85_CH00239 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.978 |
| deoA | preA | AMC85_CH00241 | AMC85_CH03446 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Dihydropyrimidine dehydrogenase subunit PreA; Protein involved in electron carrier activity, iron-sulfur cluster binding, UMP biosynthetic process and oxidation-reduction process. | 0.916 |
| deoA | preT | AMC85_CH00241 | AMC85_CH03445 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Dihydropyrimidine dehydrogenase subunit A; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process. | 0.900 |
| deoA | psuG | AMC85_CH00241 | AMC85_CH02419 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Pseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.904 |
| deoA | upp | AMC85_CH00241 | AMC85_CH00243 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.960 |
| deoD | deoA | AMC85_CH00239 | AMC85_CH00241 | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.978 |
| deoD | preA | AMC85_CH00239 | AMC85_CH03446 | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Dihydropyrimidine dehydrogenase subunit PreA; Protein involved in electron carrier activity, iron-sulfur cluster binding, UMP biosynthetic process and oxidation-reduction process. | 0.921 |
| deoD | preT | AMC85_CH00239 | AMC85_CH03445 | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Dihydropyrimidine dehydrogenase subunit A; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process. | 0.900 |
| deoD | psuG | AMC85_CH00239 | AMC85_CH02419 | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Pseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.909 |
| deoD | upp | AMC85_CH00239 | AMC85_CH00243 | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.927 |
| dht | amaB-2 | AMC85_CH03456 | AMC85_CH03454 | Dihydropyrimidinase; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides and pyrimidine base catabolic process. | N-carbamoyl-L-amino acid hydrolase 2; Protein involved in hydrolase activity and metabolic process. | 0.995 |
| dht | preA | AMC85_CH03456 | AMC85_CH03446 | Dihydropyrimidinase; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides and pyrimidine base catabolic process. | Dihydropyrimidine dehydrogenase subunit PreA; Protein involved in electron carrier activity, iron-sulfur cluster binding, UMP biosynthetic process and oxidation-reduction process. | 0.994 |
| dht | preT | AMC85_CH03456 | AMC85_CH03445 | Dihydropyrimidinase; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides and pyrimidine base catabolic process. | Dihydropyrimidine dehydrogenase subunit A; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process. | 0.976 |
| fdxB-1 | preT | AMC85_CH02433 | AMC85_CH03445 | Ferredoxin-6; Protein involved in electron carrier activity and 2 iron, 2 sulfur cluster binding. | Dihydropyrimidine dehydrogenase subunit A; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process. | 0.913 |
| gltB | ANL58776.1 | AMC85_CH03742 | AMC85_CH01363 | Glutamate synthase (NADPH) large subunit; Protein involved in catalytic activity, oxidoreductase activity, acting on the CH-NH2 group of donors, nitrogen compound metabolic process and oxidation-reduction process. | Pyridoxamine 5'-phosphate oxidase-like protein; Protein involved in FMN binding, oxidoreductase activity and oxidation-reduction process. | 0.459 |
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