STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amaB-2N-carbamoyl-L-amino acid hydrolase 2; Protein involved in hydrolase activity and metabolic process. (417 aa)    
Predicted Functional Partners:
dht
Dihydropyrimidinase; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides and pyrimidine base catabolic process.
 
 
 0.995
preA
Dihydropyrimidine dehydrogenase subunit PreA; Protein involved in electron carrier activity, iron-sulfur cluster binding, UMP biosynthetic process and oxidation-reduction process.
 
 0.933
ANL57821.1
Allantoate amidohydrolase protein; Protein involved in hydrolase activity and metabolic process.
  
  
 
0.919
amaB-1
N-carbamoyl-L-amino acid hydrolase 1; Protein involved in hydrolase activity and metabolic process.
  
  
 
0.910
preT
Dihydropyrimidine dehydrogenase subunit A; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process.
 
 
  0.891
ANL61650.1
Aldehyde dehydrogenase (NAD(+)) protein; Protein involved in oxidoreductase activity, oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, metabolic process and oxidation-reduction process.
    
 0.804
matB
malonyl-CoA synthase protein; Protein involved in catalytic activity and metabolic process.
   
 
  0.801
ANL60803.1
Restriction endonuclease type 2-like protein.
       0.776
ANL60645.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase protein; Protein involved in allantoin biosynthetic process.
   
 0.729
rutR
TetR family transcriptional regulator RutR; Protein involved in DNA binding and negative regulation of transcription, DNA-dependent.
 
     0.541
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.