STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL60876.1Transcriptional regulator protein. (154 aa)    
Predicted Functional Partners:
nifS-1
Cysteine desulfurase 1; Protein involved in catalytic activity, pyridoxal phosphate binding and metabolic process.
 
  
 0.875
nifU-2
Fe-S cluster assembly protein NifU 2; Protein involved in iron ion binding, iron-sulfur cluster binding and iron-sulfur cluster assembly.
  
  
 0.857
ANL59724.1
SUF system Fe-S cluster assembly SufA-like protein; Protein involved in structural molecule activity, iron-sulfur cluster binding and iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
  
  
 0.712
ANL60877.1
Short-chain dehydrogenase protein; Protein involved in oxidoreductase activity and metabolic process.
   
   0.483
ANL58776.1
Pyridoxamine 5'-phosphate oxidase-like protein; Protein involved in FMN binding, oxidoreductase activity and oxidation-reduction process.
  
  
 0.476
fdxB-1
Ferredoxin-6; Protein involved in electron carrier activity and 2 iron, 2 sulfur cluster binding.
  
  
 0.424
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.