STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL60930.1C4-dicarboxylate transport response regulator protein DctD; Protein involved in protein binding, nucleoside-triphosphatase activity and regulation of transcription, DNA-dependent. (444 aa)    
Predicted Functional Partners:
ANL60931.1
Sensor histidine kinase protein; Member of the two-component regulatory system DctB/DctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates DctD in response to environmental signals.
 0.994
dctB
C4-dicarboxylate transport sensor histidine kinase DctB; Member of the two-component regulatory system DctB/DctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates DctD in response to environmental signals.
 0.975
dctD
C4-dicarboxylate transport response regulator DctD; Protein involved in protein binding, nucleoside-triphosphatase activity and regulation of transcription, DNA-dependent.
  
  
 
0.905
ANL61238.1
Transcriptional regulator protein; Protein involved in protein binding and regulation of transcription, DNA-dependent.
 
     0.746
rpoN-1
RNA polymerase sigma-54 factor RpoN 1; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.739
ntrB
Protein involved in signal transducer activity and regulation of transcription, DNA-dependent.
 
 0.666
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.633
fliG
Protein involved in motor activity, ciliary or flagellar motility and chemotaxis.
  
  
 0.622
fliM
Flagellar motor switch protein FliM.
  
  
 0.619
ANL57575.1
Sensor histidine kinase FixL-like protein; Protein involved in signal transducer activity and signal transduction.
 
 
 0.581
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.