node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gluQ | rplD | AMC85_CH03969 | AMC85_CH01751 | glutamyl-Q tRNA(Asp) synthetase; Protein involved in nucleotide binding, ATP binding, ligase activity, forming aminoacyl-tRNA and related compounds and tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.988 |
gluQ | rplF | AMC85_CH03969 | AMC85_CH01765 | glutamyl-Q tRNA(Asp) synthetase; Protein involved in nucleotide binding, ATP binding, ligase activity, forming aminoacyl-tRNA and related compounds and tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.994 |
gluQ | rplM | AMC85_CH03969 | AMC85_CH01630 | glutamyl-Q tRNA(Asp) synthetase; Protein involved in nucleotide binding, ATP binding, ligase activity, forming aminoacyl-tRNA and related compounds and tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.993 |
gluQ | rplN | AMC85_CH03969 | AMC85_CH01760 | glutamyl-Q tRNA(Asp) synthetase; Protein involved in nucleotide binding, ATP binding, ligase activity, forming aminoacyl-tRNA and related compounds and tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.988 |
gluQ | rplO | AMC85_CH03969 | AMC85_CH01769 | glutamyl-Q tRNA(Asp) synthetase; Protein involved in nucleotide binding, ATP binding, ligase activity, forming aminoacyl-tRNA and related compounds and tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.991 |
gluQ | rplR | AMC85_CH03969 | AMC85_CH01766 | glutamyl-Q tRNA(Asp) synthetase; Protein involved in nucleotide binding, ATP binding, ligase activity, forming aminoacyl-tRNA and related compounds and tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.992 |
gluQ | rplV | AMC85_CH03969 | AMC85_CH01755 | glutamyl-Q tRNA(Asp) synthetase; Protein involved in nucleotide binding, ATP binding, ligase activity, forming aminoacyl-tRNA and related compounds and tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.992 |
gluQ | rplW | AMC85_CH03969 | AMC85_CH01752 | glutamyl-Q tRNA(Asp) synthetase; Protein involved in nucleotide binding, ATP binding, ligase activity, forming aminoacyl-tRNA and related compounds and tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.995 |
gluQ | rplX | AMC85_CH03969 | AMC85_CH01761 | glutamyl-Q tRNA(Asp) synthetase; Protein involved in nucleotide binding, ATP binding, ligase activity, forming aminoacyl-tRNA and related compounds and tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.992 |
gluQ | rpmC | AMC85_CH03969 | AMC85_CH01758 | glutamyl-Q tRNA(Asp) synthetase; Protein involved in nucleotide binding, ATP binding, ligase activity, forming aminoacyl-tRNA and related compounds and tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 50S ribosomal protein L29; Protein involved in structural constituent of ribosome and translation; Belongs to the universal ribosomal protein uL29 family. | 0.988 |
rplD | gluQ | AMC85_CH01751 | AMC85_CH03969 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | glutamyl-Q tRNA(Asp) synthetase; Protein involved in nucleotide binding, ATP binding, ligase activity, forming aminoacyl-tRNA and related compounds and tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.988 |
rplD | rplF | AMC85_CH01751 | AMC85_CH01765 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.998 |
rplD | rplM | AMC85_CH01751 | AMC85_CH01630 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
rplD | rplN | AMC85_CH01751 | AMC85_CH01760 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.998 |
rplD | rplO | AMC85_CH01751 | AMC85_CH01769 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.998 |
rplD | rplR | AMC85_CH01751 | AMC85_CH01766 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rplD | rplV | AMC85_CH01751 | AMC85_CH01755 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
rplD | rplW | AMC85_CH01751 | AMC85_CH01752 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rplD | rplX | AMC85_CH01751 | AMC85_CH01761 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.999 |
rplD | rpmC | AMC85_CH01751 | AMC85_CH01758 | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 50S ribosomal protein L29; Protein involved in structural constituent of ribosome and translation; Belongs to the universal ribosomal protein uL29 family. | 0.999 |