Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ANL61337.1L,D-transpeptidase domain-containing protein; Protein involved in transferase activity. (408 aa)    
Predicted Functional Partners:
ANL61338.1
Sulfurtransferase TusA-like protein; Belongs to the sulfur carrier protein TusA family.
       0.824
ANL59654.1
Hypothetical protein.
  
     0.737
ANL57839.1
Hypothetical protein.
  
    0.729
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.691
ANL59375.1
Zinc-finger CHCC-type domain-containing protein.
  
     0.644
ANL58439.1
Invasion associated locus B family protein.
  
     0.643
ANL60844.1
Hypothetical protein.
  
     0.642
ANL61051.1
Hypothetical protein.
  
     0.632
ANL61056.1
Peptidase M15 family protein.
  
    0.597
accA
acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
  
    0.594
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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