ANL61391.1 protein (Rhizobium phaseoli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ANL61391.1

Phosphonoenolpyruvate phosphonomutase protein; Protein involved in catalytic activity. (280 aa)

Predicted Functional Partners:

ANL58930.1

0.780

gltA

0.719

ANL59640.1

0.719

citA

0.719

glcB

0.557

ANL61392.1

0.470

ANL61393.1

0.424

ANL58193.1

0.412

ANL61279.1

0.412

acsA

0.412

Your Current Organism:

Rhizobium phaseoli

NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANL58193.1	ANL58930.1	AMC85_CH00770	AMC85_CH01520	acetoacetyl-CoA synthetase protein; Protein involved in acetoacetate-CoA ligase activity and lipid metabolic process.	Protein involved in 2-methylcitrate dehydratase activity and propionate catabolic process.	0.418
ANL58193.1	ANL59640.1	AMC85_CH00770	AMC85_CH02265	acetoacetyl-CoA synthetase protein; Protein involved in acetoacetate-CoA ligase activity and lipid metabolic process.	Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.	0.548
ANL58193.1	ANL61391.1	AMC85_CH00770	AMC85_CH04069	acetoacetyl-CoA synthetase protein; Protein involved in acetoacetate-CoA ligase activity and lipid metabolic process.	Phosphonoenolpyruvate phosphonomutase protein; Protein involved in catalytic activity.	0.412
ANL58193.1	citA	AMC85_CH00770	AMC85_CH02266	acetoacetyl-CoA synthetase protein; Protein involved in acetoacetate-CoA ligase activity and lipid metabolic process.	Citrate synthase; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process; Belongs to the citrate synthase family.	0.548
ANL58193.1	glcB	AMC85_CH00770	AMC85_CH00055	acetoacetyl-CoA synthetase protein; Protein involved in acetoacetate-CoA ligase activity and lipid metabolic process.	Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.	0.546
ANL58193.1	gltA	AMC85_CH00770	AMC85_CH02047	acetoacetyl-CoA synthetase protein; Protein involved in acetoacetate-CoA ligase activity and lipid metabolic process.	Citrate synthase; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process; Belongs to the citrate synthase family.	0.548
ANL58930.1	ANL58193.1	AMC85_CH01520	AMC85_CH00770	Protein involved in 2-methylcitrate dehydratase activity and propionate catabolic process.	acetoacetyl-CoA synthetase protein; Protein involved in acetoacetate-CoA ligase activity and lipid metabolic process.	0.418
ANL58930.1	ANL59640.1	AMC85_CH01520	AMC85_CH02265	Protein involved in 2-methylcitrate dehydratase activity and propionate catabolic process.	Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.	0.746
ANL58930.1	ANL61391.1	AMC85_CH01520	AMC85_CH04069	Protein involved in 2-methylcitrate dehydratase activity and propionate catabolic process.	Phosphonoenolpyruvate phosphonomutase protein; Protein involved in catalytic activity.	0.780
ANL58930.1	citA	AMC85_CH01520	AMC85_CH02266	Protein involved in 2-methylcitrate dehydratase activity and propionate catabolic process.	Citrate synthase; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process; Belongs to the citrate synthase family.	0.746
ANL58930.1	gltA	AMC85_CH01520	AMC85_CH02047	Protein involved in 2-methylcitrate dehydratase activity and propionate catabolic process.	Citrate synthase; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process; Belongs to the citrate synthase family.	0.746
ANL59640.1	ANL58193.1	AMC85_CH02265	AMC85_CH00770	Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.	acetoacetyl-CoA synthetase protein; Protein involved in acetoacetate-CoA ligase activity and lipid metabolic process.	0.548
ANL59640.1	ANL58930.1	AMC85_CH02265	AMC85_CH01520	Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.	Protein involved in 2-methylcitrate dehydratase activity and propionate catabolic process.	0.746
ANL59640.1	ANL61279.1	AMC85_CH02265	AMC85_CH03955	Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.	AMP-dependent synthetase/ligase protein; Protein involved in catalytic activity and metabolic process.	0.963
ANL59640.1	ANL61391.1	AMC85_CH02265	AMC85_CH04069	Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.	Phosphonoenolpyruvate phosphonomutase protein; Protein involved in catalytic activity.	0.719
ANL59640.1	acsA	AMC85_CH02265	AMC85_CH04388	Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.	acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.	0.960
ANL59640.1	citA	AMC85_CH02265	AMC85_CH02266	Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.	Citrate synthase; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process; Belongs to the citrate synthase family.	0.966
ANL59640.1	glcB	AMC85_CH02265	AMC85_CH00055	Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.	Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.	0.974
ANL59640.1	gltA	AMC85_CH02265	AMC85_CH02047	Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.	Citrate synthase; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process; Belongs to the citrate synthase family.	0.928
ANL61279.1	ANL59640.1	AMC85_CH03955	AMC85_CH02265	AMP-dependent synthetase/ligase protein; Protein involved in catalytic activity and metabolic process.	Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.	0.963