STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL61553.1Cyclic nucleotide-binding domain-containing protein. (151 aa)    
Predicted Functional Partners:
ANL61097.1
Adenylate cyclase protein; Protein involved in protein binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.
 
 
 0.930
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
 
 0.912
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.898
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.897
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
 
 0.886
cya-2
Adenylate cyclase 2; Protein involved in protein binding, protein transport and intracellular signal transduction.
 
 
 0.644
ANL60173.1
Adenylate cyclase family 3 protein; Protein involved in phosphorus-oxygen lyase activity, cyclic nucleotide biosynthetic process and intracellular signal transduction.
 
 
 0.611
ANL60014.1
Adenylate/guanylate cyclase protein; Protein involved in phosphorus-oxygen lyase activity, cyclic nucleotide biosynthetic process and intracellular signal transduction.
 
 
 0.588
ANL58694.1
Adenylate/guanylate cyclase protein; Protein involved in phosphorus-oxygen lyase activity, cyclic nucleotide biosynthetic process and intracellular signal transduction.
 
 
  0.565
ANL59804.1
Sensor histidine kinase domain-containing protein; Protein involved in signal transducer activity and two-component signal transduction system (phosphorelay).
      
 0.563
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.