STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exoB-3UDP-glucose 4-epimerase 3; Protein involved in nucleotide binding, coenzyme binding and galactose metabolic process; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (327 aa)    
Predicted Functional Partners:
exoN
UTP-glucose-1-phosphate uridylyltransferase; Protein involved in nucleotidyltransferase activity and biosynthetic process.
 
  
 0.943
rkpK
UDP-glucose 6-dehydrogenase; Protein involved in oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, NAD binding and oxidation-reduction process.
  
 
 0.922
ANL60712.1
NAD-dependent epimerase/dehydratase family protein; Protein involved in nucleotide binding, coenzyme binding and cellular metabolic process.
 
0.913
exoB-2
UDP-glucose 4-epimerase 2; Protein involved in nucleotide binding, coenzyme binding and galactose metabolic process; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
 
0.911
ANL60968.1
UDP-sulfoquinovose synthase protein; Protein involved in nucleotide binding, coenzyme binding and cellular metabolic process.
  
 0.906
ANL61571.1
Protein involved in catalytic activity and metabolic process.
       0.779
noeJ
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Protein involved in nucleotidyltransferase activity and lipopolysaccharide biosynthetic process; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.592
galM
Aldose-1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.514
ANL60714.1
Polysaccharide deacetylase/methyltransferase/glycosyltransferase domain-containing protein; Protein involved in catalytic activity, carbohydrate metabolic process and nodulation.
 
   
 0.507
ANL58581.1
Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.
  
  
 0.496
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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