STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdxAFerredoxin-2; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (112 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
  
 0.910
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
      
 0.682
fumA
Fumarate hydratase class 1; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.511
ANL61613.1
Protein involved in nucleic acid binding, helicase activity and ATP binding.
       0.497
ANL61614.1
RNA-binding S4 domain-containing protein; Protein involved in RNA binding.
       0.497
preT
Dihydropyrimidine dehydrogenase subunit A; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process.
  
 
 0.491
gltD
Glutamate synthase (NADPH) small subunit; Protein involved in oxidoreductase activity, iron-sulfur cluster binding and oxidation-reduction process.
  
 
 0.491
preA
Dihydropyrimidine dehydrogenase subunit PreA; Protein involved in electron carrier activity, iron-sulfur cluster binding, UMP biosynthetic process and oxidation-reduction process.
     
 0.480
ANL60913.1
Divalent ion symporter protein; Protein involved in citrate transmembrane transporter activity, citrate transport and transmembrane transport.
     
 0.479
ANL58776.1
Pyridoxamine 5'-phosphate oxidase-like protein; Protein involved in FMN binding, oxidoreductase activity and oxidation-reduction process.
     
 0.450
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.