Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANL61679.1 | dnaE2-1 | AMC85_CH04360 | AMC85_CH04042 | Inducible mutagenesis ImuA-like protein. | Error-prone DNA polymerase 1; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.608 |
| ANL61679.1 | dnaE2-2 | AMC85_CH04360 | AMC85_CH04358 | Inducible mutagenesis ImuA-like protein. | Error-prone DNA polymerase 2; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.880 |
| ANL61679.1 | imuB-1 | AMC85_CH04360 | AMC85_CH04359 | Inducible mutagenesis ImuA-like protein. | DNA-repair protein ImuB 1; Protein involved in damaged DNA binding, DNA-directed DNA polymerase activity and DNA repair. | 0.972 |
| dnaE1 | dnaN | AMC85_CH01694 | AMC85_CH00356 | DNA polymerase III subunit alpha; Protein involved in catalytic activity, DNA-directed DNA polymerase activity and DNA replication. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.992 |
| dnaE1 | holB | AMC85_CH01694 | AMC85_CH02239 | DNA polymerase III subunit alpha; Protein involved in catalytic activity, DNA-directed DNA polymerase activity and DNA replication. | DNA polymerase III delta' subunit. | 0.991 |
| dnaE1 | imuA | AMC85_CH01694 | AMC85_CH04044 | DNA polymerase III subunit alpha; Protein involved in catalytic activity, DNA-directed DNA polymerase activity and DNA replication. | Inducible mutagenesis protein ImuA. | 0.670 |
| dnaE1 | imuB-1 | AMC85_CH01694 | AMC85_CH04359 | DNA polymerase III subunit alpha; Protein involved in catalytic activity, DNA-directed DNA polymerase activity and DNA replication. | DNA-repair protein ImuB 1; Protein involved in damaged DNA binding, DNA-directed DNA polymerase activity and DNA repair. | 0.781 |
| dnaE1 | polA | AMC85_CH01694 | AMC85_CH00194 | DNA polymerase III subunit alpha; Protein involved in catalytic activity, DNA-directed DNA polymerase activity and DNA replication. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.639 |
| dnaE1 | recA | AMC85_CH01694 | AMC85_CH02417 | DNA polymerase III subunit alpha; Protein involved in catalytic activity, DNA-directed DNA polymerase activity and DNA replication. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.567 |
| dnaE2-1 | ANL61679.1 | AMC85_CH04042 | AMC85_CH04360 | Error-prone DNA polymerase 1; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | Inducible mutagenesis ImuA-like protein. | 0.608 |
| dnaE2-1 | dnaN | AMC85_CH04042 | AMC85_CH00356 | Error-prone DNA polymerase 1; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.896 |
| dnaE2-1 | holB | AMC85_CH04042 | AMC85_CH02239 | Error-prone DNA polymerase 1; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | DNA polymerase III delta' subunit. | 0.896 |
| dnaE2-1 | imuA | AMC85_CH04042 | AMC85_CH04044 | Error-prone DNA polymerase 1; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | Inducible mutagenesis protein ImuA. | 0.965 |
| dnaE2-1 | imuB-1 | AMC85_CH04042 | AMC85_CH04359 | Error-prone DNA polymerase 1; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | DNA-repair protein ImuB 1; Protein involved in damaged DNA binding, DNA-directed DNA polymerase activity and DNA repair. | 0.947 |
| dnaE2-1 | lexA | AMC85_CH04042 | AMC85_CH02049 | Error-prone DNA polymerase 1; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.523 |
| dnaE2-1 | polA | AMC85_CH04042 | AMC85_CH00194 | Error-prone DNA polymerase 1; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.592 |
| dnaE2-2 | ANL61679.1 | AMC85_CH04358 | AMC85_CH04360 | Error-prone DNA polymerase 2; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | Inducible mutagenesis ImuA-like protein. | 0.880 |
| dnaE2-2 | dnaN | AMC85_CH04358 | AMC85_CH00356 | Error-prone DNA polymerase 2; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.896 |
| dnaE2-2 | holB | AMC85_CH04358 | AMC85_CH02239 | Error-prone DNA polymerase 2; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | DNA polymerase III delta' subunit. | 0.896 |
| dnaE2-2 | imuA | AMC85_CH04358 | AMC85_CH04044 | Error-prone DNA polymerase 2; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | Inducible mutagenesis protein ImuA. | 0.883 |
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