Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (344 aa)    
Predicted Functional Partners:
lysC
Protein involved in aspartate kinase activity and lysine biosynthetic process via diaminopimelate; Belongs to the aspartokinase family.
 
 
 0.995
hom-1
Protein involved in homoserine dehydrogenase activity, NADP binding, cellular amino acid metabolic process and oxidation-reduction process.
 
 0.983
dapA-1
Dihydrodipicolinate synthase 1; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
 
 0.966
ANL58075.1
Dihydrodipicolinate synthetase-like protein; Protein involved in catalytic activity and metabolic process; Belongs to the DapA family.
 
 
 0.950
dapA-2
Dihydrodipicolinate synthase 2; Protein involved in catalytic activity and metabolic process; Belongs to the DapA family.
 
 
 0.946
ANL61458.1
Dihydrodipicolinate synthetase-like protein; Protein involved in catalytic activity and metabolic process; Belongs to the DapA family.
 
 
 0.941
aroE-1
Shikimate 5-dehydrogenase 1; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
 
 
 0.759
ANL58832.1
Histidinol-phosphate aminotransferase protein; Protein involved in catalytic activity, pyridoxal phosphate binding and biosynthetic process.
  
  
 0.758
oppD
Oligopeptide ABC transporter ATP-binding protein OppD; Protein involved in nucleotide binding, ATP binding and peptide transport; Belongs to the ABC transporter superfamily.
      
 0.718
gltB
Glutamate synthase (NADPH) large subunit; Protein involved in catalytic activity, oxidoreductase activity, acting on the CH-NH2 group of donors, nitrogen compound metabolic process and oxidation-reduction process.
  
  
 0.697
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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