STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF93_00490Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)    
Predicted Functional Partners:
BF93_00485
Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.717
BF93_00495
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.562
glgE
Hypothetical protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
 
  0.518
BF93_00480
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.491
BF93_12270
Asparagine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.489
BF93_08500
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.488
BF93_07360
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.463
BF93_04560
Amylosucrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.455
BF93_08915
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.455
BF93_08920
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.455
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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