STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF93_01840Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (295 aa)    
Predicted Functional Partners:
BF93_11430
PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.881
BF93_05805
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.726
BF93_10185
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.672
BF93_15995
Biopolymer transporter Tol; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.672
BF93_07910
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.535
BF93_07915
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.535
BF93_16765
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.535
BF93_02190
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.531
BF93_08430
Sortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.511
BF93_15055
Peptidase C60; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.511
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.