Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF93_02260Preprotein translocase subunit TatA; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)    
Predicted Functional Partners:
tatC
Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
  
 
 0.964
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.862
BF93_02200
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
BF93_14045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.676
BF93_05555
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
BF93_03905
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.643
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
  
 0.634
BF93_02265
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.620
BF93_13830
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
BF93_06585
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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