STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF93_02515Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)    
Predicted Functional Partners:
BF93_02465
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.999
BF93_02510
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.878
BF93_02505
Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.875
BF93_04955
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.680
BF93_02445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.672
BF93_02160
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
BF93_00200
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.611
rbpA
Electron transporter; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.611
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
    0.593
BF93_01885
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.